# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "plinkQC" in publications use:' type: software license: MIT title: 'plinkQC: Genotype Quality Control with ''PLINK''' version: 0.3.4 doi: 10.32614/CRAN.package.plinkQC abstract: Genotyping arrays enable the direct measurement of an individuals genotype at thousands of markers. 'plinkQC' facilitates genotype quality control for genetic association studies as described by Anderson and colleagues (2010) . It makes 'PLINK' basic statistics (e.g. missing genotyping rates per individual, allele frequencies per genetic marker) and relationship functions accessible from 'R' and generates a per-individual and per-marker quality control report. Individuals and markers that fail the quality control can subsequently be removed to generate a new, clean dataset. Removal of individuals based on relationship status is optimised to retain as many individuals as possible in the study. authors: - family-names: Meyer given-names: Hannah email: hannah.v.meyer@gmail.com orcid: https://orcid.org/0000-0003-4564-0899 repository: https://meyer-lab-cshl.r-universe.dev repository-code: https://github.com/meyer-lab-cshl/plinkQC commit: a0337eb0c6cbf3d90fa35727bf95f973fc9f84a7 url: https://meyer-lab-cshl.github.io/plinkQC/ contact: - family-names: Meyer given-names: Hannah email: hannah.v.meyer@gmail.com orcid: https://orcid.org/0000-0003-4564-0899